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263
ioapi-3.2/Makefile
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263
ioapi-3.2/Makefile
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#.........................................................................
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# VERSION "$Id: Makefile.template 1 2017-06-10 18:05:20Z coats $"
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# EDSS/Models-3 I/O API Version 3.2.
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#.........................................................................
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# COPYRIGHT
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# (C) 1992-2002 MCNC and Carlie J. Coats, Jr., and
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# (C) 2003-2004 by Baron Advanced Meteorological Systems,
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# (C) 2005-2014 Carlie J. Coats, Jr., and
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# (C) 2014- UNC Institute for the Environment
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# Distributed under the GNU Lesser PUBLIC LICENSE version 2.1
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# See file "LGPL.txt" for conditions of use.
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#.........................................................................
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# Usage:
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# Either edit this Makefile to un-comment the options you want, or
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# override the options by environment or command-line variables.
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# For example:
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#
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# setenv BIN Linux2_x86_64ifort
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# setenv BASEDIR /wherever/I-ve/un-tarred/the/code
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# setenv CPLMODE nocpl
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# make
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#
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# or:
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#
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# make BIN=Linux2_x86_64pg CPLMODE=pncf INSTALL=/foo/bar
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#
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#.........................................................................
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# Environment/Command-line Variables:
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#
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# BIN machine/OS/compiler/mode type. Shows up as suffix
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# for "$(IODIR)/Makeinclude.$(BIN)" to determine compilation
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# flags, and in $(OBJDIR) and $(INSTALL) to determine
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# binary directories
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#
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# INSTALL installation-directory root, used for "make install":
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# "libioapi.a" and the tool executables will be installed
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# in $(INSTALL)/$(BIN)
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#
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# LIBINST overrides $(INSTALL)/$(BIN) for libioapi.a
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#
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# BININST overrides $(INSTALL)/$(BIN) for M3TOOLS executables
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#.........................................................................
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# Directories:
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#
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# $(BASEDIR) is the root directory for the I/O API library source,
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# the M3Tools and M3Test source,the HTML documentation,
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# and the (machine/compiler/flag-specific) binary
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# object/library/executable directories.
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# $(HTMLDIR) is the web documentation
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# $(IODIR) is the I/O API library source
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# $(TOOLDIR) is the "M3TOOLS" source
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# $(OBJDIR) is the current machine/compiler/flag-specific
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# build-directory
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# $(INSTALL) installation-directory root, used for "make install":
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# "libioapi.a" and the tool executables will be installed
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# in $(INSTALL)/$(BIN) object/library/executable directory
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#.........................................................................
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# Note On Library Versions and configuration:
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#
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# Environment variable "BIN" specifies library version up to
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# link- and compile-flag compatibility. Dependecies upon machine,
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# OS, and compiler are found in file "Makeinclude.$(BIN)".
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# Command-line "make BIN=<something>..." overrides environment
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# variable "% setenv BIN <something>" which overrides the
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# make-variable default below.
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#
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# IN PARTICULAR, pay attention to the notes for various versions
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# that may be built for Linux x86 with the Portland Group
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# compilers: see comments in $(IODIR)/include 'MAKEINCLUDE'.Linux2_x86pg
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#.........................................................................
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# Special Make-targets
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#
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# configure: "Makefile"s, with the definitions indicated below.
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# all: OBJDIR, FIXDIR, libioapi.a, and executables, with
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# the current mode.
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# lib: OBJDIR, FIXDIR, libioapi.a
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# clean: remove .o's, libioapi.a, and executables from OBJDIR
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# rmexe: remove executables from OBJDIR
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# relink: rebuild executables from OBJDIR
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# install: copy "libioapi.a" and executables to $(INSTDIR)
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# dirs: make OBJDIR and FIXDIR directories
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# fix: FIXDIR and extended-fixed-source INCLUDE-files
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# gtar: GZipped tar-file of the source and docs
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# nametest: test of name-mangling compatibility (requires that
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# libnetcdff.a be manually placed into $(OBJDIR))
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#
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######################################################################
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# ---------- Definitions for "make configure" ------------------
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#
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# VERSIONING DEFINITIONS: the preprocessor definitions in $(IOAPIDEFS)
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# (below) govern I/O API behavior; versions with distinct combinations
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# of these options are NOT library- nor object-compatible and should
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# be built in *distinct* $(OBJDIR)s:
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#
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# Defining IOAPICPL turns on PVM-enabled "coupling mode" and
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# requires "libpvm3.a" for linking.
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#
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# Defining IOAPI_PNCF turns on PnetCDF based distributed I/O
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# and requires libpnetcdf.a and libmpi.a for linking; it should
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# be used only with an MPI-based ${BIN} (e.g., Linux2_x86_64ifortmpi)
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#
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# Defining IOAPI_NCF4 turns on full netCDF-4 interfaces, including
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# support for INTEGER*8 variables and attributes. It requires
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# extra libraries for linking, which can be found by running the
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# commands "nf-config --flibs" and "nc-config --libs"
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#
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# Defining IOAPI_NO_STDOUT suppresses WRITEs to the screen in
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# routines INIT3(), M3MSG2(), M3MESG(), M3PARAG(), and M3ABORT().
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# This also helps control the "double-printed-message" behavior
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# caused by recent SGI compilers.
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#
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# Defining IO_360 creates the 360-day "global climate" version
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# of the library.
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#
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# Defining BIN3_DEBUG turns on trace-messages for native-binary
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# mode routines.
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######################################################################
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# ---------- Default/fall-back Definitions --------------------
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# For POSIX "make", environment variables override these;
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# variable setting on the command line ("make VAR=VALUE ...")
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# overrides that.
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#
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# GNU "make" DOES NOT FOLLOW POSIX, AND INSTEAD DOES ITS OWN
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# WRONG-HEADED THING, MAKING IT IMPOSSIBLE TO HAVE DEFAULTS
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# THAT ARE THEN OVER-RIDDEN BY THE ENVIRONMENT !!
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#
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# BIN : Use 64-bit gcc/gfortran
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# BASEDIR : source under this current directory
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# INSTALL : installation directly under ${HOME}
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# LIBINST : for installation of library
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# BININST : for installation of m3tools executables
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# CPLMODE : nocpl
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# IOAPIDEFS : none (can override for climo-year, etc.
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# PVMINCL : none
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# NCFLIBS : assumes netCDF-4-style separate libs
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#
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#
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# BIN = Linux2_x86_64
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# BASEDIR = ${PWD}
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# INSTALL = ${HOME}
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# LIBINST = $(INSTALL)/$(BIN)
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# BININST = $(INSTALL)/$(BIN)
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# CPLMODE = nocpl
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# IOAPIDEFS =
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# PVMINCL =
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# NCFLIBS = -lnetcdff -lnetcdf
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#
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# **** Variants ****
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#
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# BASEDIR = ${HOME}/ioapi-3.2 # fall-back to versioned source under this directory
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#
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# CPLMODE = cpl # turn on PVM coupling mode
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# PVMINCL = $(PVM_ROOT)/conf/$(PVM_ARCH).def
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# IOAPIDEFS = "-DIOAPICPL"
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#
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# CPLMODE = pncf # turn on PnetCDF distributed-file mode
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# NCFLIBS = -lpnetcdf -lnetcdff -lnetcdf
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# IOAPIDEFS = "-DIOAPI_PNCF"
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#
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# NCFLIBS = -lnetcdf # Assumes netcdf-3-style unified libs
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# IOAPIDEFS = "-DIOAPI_PNCF"
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#
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# NCFLIBS = -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz # netcdf-4 with HDF but not DAP
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# IOAPIDEFS = "-DIOAPI_NCF4"
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#
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# NCFLIBS = -lpnetcdf -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz # PnetCDF+netcdf-4 with HDF but not DAP
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# IOAPIDEFS = "-DIOAPI_PNCF -DIOAPI_NCF4"
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#
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# NCFLIBS = "-lnetcdff -lnetcdf -lhdf5hl_fortran -lhdf5_fortran -lhdf5_hl -lhdf5 -lmfhdf -ldf -ljpeg -lm -lz -lcurl -lsz" # all-out netcdf-4
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#
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# NCFLIBS = "`nf-config --flibs` `nc-config --libs`" # general-case netcdf-4 with NetCDF "bin" in ${path}
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#
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# INSTALL = <installation base-directory> -- what GNU "configure" calls "--prefix=..."
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# LIBINST = $(INSTALL)/lib
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# BININST = $(INSTALL)/bin
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# ---------- Edit-command used by "make configure" to customize the "*/Makefile*"
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SEDCMD = \
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-e 's|IOAPI_BASE|$(BASEDIR)|' \
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-e 's|LIBINSTALL|$(LIBINST)|' \
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-e 's|BININSTALL|$(BININST)|' \
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-e 's|IOAPI_DEFS|$(IOAPIDEFS)|' \
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-e 's|NCFLIBS|$(NCFLIBS)|' \
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-e 's|MAKEINCLUDE|include $(IODIR)/Makeinclude|' \
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-e 's|PVMINCLUDE|include $(PVMINCL)|'
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# ---------- I/O API Build System directory definitions --------
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VERSION = 3.2-${CPLMODE}
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BASEDIR = ${PWD}
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NCFLIBS = -lnetcdff -lnetcdf
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IODIR = $(BASEDIR)/ioapi
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FIXDIR = $(IODIR)/fixed_src
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HTMLDIR = $(BASEDIR)/HTML
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TOOLDIR = $(BASEDIR)/m3tools
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OBJDIR = $(BASEDIR)/$(BIN)
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# ---------------------- TOP-LEVEL TARGETS: ------------------
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#
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all: dirs fix configure
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(cd $(IODIR) ; make BIN=${BIN} all)
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(cd $(TOOLDIR) ; make BIN=${BIN} all)
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test:
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(cd $(BASEDIR)/tests; ioapitest.csh ${BASEDIR} ${BIN} )
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configure: ${IODIR}/Makefile ${TOOLDIR}/Makefile
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(cd $(IODIR) ; sed $(SEDCMD) < Makefile.$(CPLMODE).sed > Makefile )
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(cd $(TOOLDIR) ; sed $(SEDCMD) < Makefile.$(CPLMODE).sed > Makefile )
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bins: dirs
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(cd $(IODIR) ; make bins)
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(cd $(TOOLDIR) ; make bins)
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clean:
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(cd $(IODIR) ; make BIN=${BIN} -i clean)
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(cd $(TOOLDIR) ; make BIN=${BIN} -i clean)
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binclean: dirs
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(cd $(IODIR) ; make binclean)
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(cd $(TOOLDIR) ; make binclean)
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relink:
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(cd $(TOOLDIR) ; make BIN=${BIN} relink)
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binrelink:
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(cd $(TOOLDIR) ; make binrelink)
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install: $(LIBINST) $(BININST)
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echo "Installing I/O API and M3TOOLS in $(LIBINST) and $(BININST)"
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(cd $(IODIR) ; make BIN=${BIN} INSTDIR=${LIBINST} install)
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(cd $(TOOLDIR) ; make BIN=${BIN} INSTDIR=${BININST} install)
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dirs: $(OBJDIR) $(FIXDIR)
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fix:
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(cd $(IODIR) ; make fixed_src)
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gtar:
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cd $(BASEDIR); date > VERSION.txt; \
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gtar cvfz ioapi-$(VERSION).tar.gz --dereference -X exclude \
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Makefile* *.txt exclude ioapi HTML m3tools tests
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lib: dirs
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(cd $(IODIR) ; make all)
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nametest: lib $(OBJDIR)/libnetcdff.a
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(cd $(IODIR) ; make nametest)
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$(FIXDIR):
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mkdir -p $(FIXDIR)
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$(OBJDIR):
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mkdir -p $(OBJDIR)
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$(LIBINST): $(INSTALL)
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cd $(INSTALL); mkdir -p $(LIBINST)
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$(BININST): $(INSTALL)
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cd $(INSTALL); mkdir -p $(BININST)
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116
ioapi-3.2/ioapi/Makeinclude.Linux2_x86_64ifort
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116
ioapi-3.2/ioapi/Makeinclude.Linux2_x86_64ifort
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# Version "$Id: Makeinclude.Linux2_x86_64ifort 1 2017-06-10 18:05:20Z coats $"
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#
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# Michael Bane (UManchester UK) reports that for ifort version 9,
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# -stack_temps -safe_cray_ptr are not supported and that there are
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# problems with "-unroll" without an unroll-count (bug reported
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# to Intel)
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AR = ar
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CC = icc
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CXX = icpc
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FC = ifort -auto -warn notruncated_source -Bstatic -static-intel
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M4 = m4
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LINK = $(CC)
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## Module-include-directory command
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MODI = -I
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E132 = -extend-source 132
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# MFLAGS = -traceback # generic
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# MFLAGS = -traceback -msse4.1 -xSSE4.1 # penryn
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# MFLAGS = -traceback -mavx2 -xAVX -march=corei7-avx # SandyBridge
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# MFLAGS = -traceback -mavx -xAVX2 -march=corei7-avx2 # Haswell
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MFLAGS = -traceback -xHost # this-machine
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OMPFLAGS = -openmp # for Intel compilers, version 15 or earlier
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OMPLIBS = -openmp
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# OMPFLAGS = -openmp -qopenmp
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# OMPLIBS = -openmp -qopenmp -qopenmp-link=static -shared_intel
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COPTFLAGS = -O3 ${MFLAGS}
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FOPTFLAGS = -O3 -unroll -stack_temps -safe_cray_ptr \
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-convert big_endian -assume byterecl ${MFLAGS}
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FPPFLAGS = -DF90=1
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FSFLAGS = -save
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ARCHFLAGS = \
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-DAUTO_ARRAYS=1 \
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-DF90=1 -DFLDMN=1 \
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-DFSTR_L=int \
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-DIOAPI_NO_STDOUT=1 \
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-DAVOID_FLUSH=1 -DBIT32=1
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PARFLAGS =
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ARCHLIB = -Bstatic
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# M4DEFFILE = $(PVM_ROOT)/conf/$(PVM_ARCH).m4
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# PVMLIBS = -L$(PVM_ROOT)/lib/$(PVM_ARCH) -lpvm3
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PVMLIBS =
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AR = ar
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CC = icc
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CXX = icpc
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FC = ifort
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M4 = m4
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LINK = $(FC)
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MODI = -I
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E132 = -extend-source 132
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# Optimization
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MFLAGS = -traceback -xHost
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# OpenMP (modern Intel)
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OMPFLAGS = -qopenmp
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OMPLIBS = -qopenmp
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# Compiler flags
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COPTFLAGS = -O3 $(MFLAGS)
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FOPTFLAGS = -O3 -unroll \
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-convert big_endian -assume byterecl \
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$(MFLAGS)
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FPPFLAGS = -DF90=1
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FSFLAGS = -save
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# Architecture flags
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ARCHFLAGS = \
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-DAUTO_ARRAYS=1 \
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-DF90=1 -DFLDMN=1 \
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-DFSTR_L=int \
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-DIOAPI_NO_STDOUT=1 \
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-DAVOID_FLUSH=1
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# MPI + NetCDF (IMPORTANT)
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PARFLAGS = -DIOAPI_PNCF=1
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# Remove static linking (containers hate this)
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ARCHLIB =
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# Libraries (you must link these)
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NETCDFLIB = -L$(NETCDF_LIBDIR) -lnetcdff -lnetcdf
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MPILIBS = -lmpi
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# Combine
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LIBS = $(NETCDFLIB) $(MPILIBS) $(OMPLIBS)
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PVMLIBS =
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